JOBIM 2020 - Sciencesconf.org

Keynote: Kjell Petersen

Salle 1: Keynote Kjell Petersen

E-infrastructure, platforms and services provided by Elixir Norway

Posters & demos

Salle virtuelle des posters

2

IFB Session

Salle 2: Platforms and Services in Bioinformatics

› Ensembl 2020, data growth - Species Quick Release Processing - Marc Chakiachvili 11:00-11:20 (20min)

› nf-core, a community effort for collaborative, peer-reviewed analysis pipelines - Maxime Garcia 11:20-11:40 (20min)

› Fostering Open Science and FAIR practices among the IFB infrastructures : the OpenLink and maDMP4LS projects - Julien Seiler / Olivier Collin 11:40-12:00 (20min)

› What's new on IFB NNCR Cluster(s) ? - Gildas Le Corguillé / Julien Seiler 12:00-12:20 (20min)

› Bio2M platform: find everything in your RNA-Seq data - Anthony Boureux 12:20-12:40 (20min)

Statistics & Machine Learning

Salle 3: Statistics and Machine Learning

› Consensus clustering applied to multi-omic disease subtyping - Marie-Galadriel Briere 11:00-11:20 (20min)

› Bringing ABC inference to the machine learning realm : AbcRanger,an optimized random forests library for ABC - François-David Collin 11:20-11:40 (20min)

› On the accuracy in high‐dimensional linear models and its application to genomic selection - Charles-Elie Rabier 11:40-12:00 (20min)

› Towards CNNs Representations for Small Data Classification - Khawla Seddiki 12:00-12:20 (20min)

Break

Keynote: Martin Weigt

Salle 1: Keynote Martin Weigt, Mini-symposium Long Reads

Protein sequence landscapes: from data-driven models to evolution-guided sequence design

Break

Mini Symp. Long reads

Salle 1: Keynote Martin Weigt, Mini-symposium Long Reads

Programme

› Long reads in the wide - Jean-Marc Aury, Commissariat à l'Energie Atomique (CEA), Genoscope, Institut de Biologie François-Jacob - Vincent Lacroix, ERABLE, Laboratoire de Biométrie et Biologie Evolutive UMR5558 - Hélène Touzet, 2. Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US 41 - UMS 2014 - PLBS, bilille, F-59000 Lille, France., 3. Univ. Lille, CNRS, Centrale Lille, UMR 9189 - CRIStAL - Centre de Recherche en Informatique Signal et Automatique de Lille, F-59000 Lille, France. 15:10-17:40 (2h30)

Mini Symp. Deep learning

Salle 2: Mini-symposium Deep Learning for Omics

Programme

› Deep learning for omics - Laurent Jacob, Laboratoire de Biométrie et Biologie Evolutive - Raphaël Mourad, Laboratoire de Biologie Cellulaire et Moléculaire du Contrôle de la Prolifération - Vera Pancaldi, Centre de Recherche en Cancérologie de Toulouse - Elissar Nasseredine, CBI, Toulouse - Vincent Rocher, Syndicat interdépartemental pour l'assainissement de l'agglomération parisienne - Mathys Grapotte, Sanofi-Aventis R&D, Institut de Génétique Moléculaire de Montpellier, Laboratoire dÍnformatique de Robotique et de Microélectronique de Montpellier - Arnaud Abreu, Laboratoire des sciences de língénieur, de línformatique et de límagerie 15:10-17:40 (2h30)

Mini Symp. RNA structure

Salle 3: Mini-symposium RNA Structure

Programme

› RNA structure, design and interaction with proteins - Petr Sulc, Rockefeller University - Samuela Pasquali, Cibles Thérapeutiques et conception de médicaments - Fabrice Leclerc, Institut de Biologie Intégrative de la Cellule - Sebastian Will, Laboratoire dínformatique de l\'École polytechnique [Palaiseau] 15:10-17:40 (2h30)