› A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios - Anna Zhukova
15:10-15:30 (20min)
› Quantifying transmission dynamics of acute hepatitis C virus infections in a heterogeneous population using sequence data - Gonché Danesh
15:30-15:50 (20min)
› Evolution of replication origins in vertebrate genomes: rapid turnover despite selective constraints - Florian Massip
15:50-16:10 (20min)
› Ensembl 2020, data growth - Species Quick Release Processing - Marc Chakiachvili
11:00-11:20 (20min)
› nf-core, a community effort for collaborative, peer-reviewed analysis pipelines - Maxime Garcia
11:20-11:40 (20min)
› Fostering Open Science and FAIR practices among the IFB infrastructures : the OpenLink and maDMP4LS projects - Julien Seiler / Olivier Collin
11:40-12:00 (20min)
› What's new on IFB NNCR Cluster(s) ? - Gildas Le Corguillé / Julien Seiler
12:00-12:20 (20min)
› Bio2M platform: find everything in your RNA-Seq data - Anthony Boureux
12:20-12:40 (20min)
› Long reads in the wide - Jean-Marc Aury, Commissariat à l'Energie Atomique (CEA), Genoscope, Institut de Biologie François-Jacob - Vincent Lacroix, ERABLE, Laboratoire de Biométrie et Biologie Evolutive UMR5558 - Hélène Touzet, 2. Univ. Lille, CNRS, Inserm, CHU Lille, Institut Pasteur de Lille, US 41 - UMS 2014 - PLBS, bilille, F-59000 Lille, France., 3. Univ. Lille, CNRS, Centrale Lille, UMR 9189 - CRIStAL - Centre de Recherche en Informatique Signal et Automatique de Lille, F-59000 Lille, France.
15:10-17:40 (2h30)
› Deep learning for omics - Laurent Jacob, Laboratoire de Biométrie et Biologie Evolutive - Raphaël Mourad, Laboratoire de Biologie Cellulaire et Moléculaire du Contrôle de la Prolifération - Vera Pancaldi, Centre de Recherche en Cancérologie de Toulouse - Elissar Nasseredine, CBI, Toulouse - Vincent Rocher, Syndicat interdépartemental pour l'assainissement de l'agglomération parisienne - Mathys Grapotte, Sanofi-Aventis R&D, Institut de Génétique Moléculaire de Montpellier, Laboratoire dÍnformatique de Robotique et de Microélectronique de Montpellier - Arnaud Abreu, Laboratoire des sciences de língénieur, de línformatique et de límagerie
15:10-17:40 (2h30)
› RNA structure, design and interaction with proteins - Petr Sulc, Rockefeller University - Samuela Pasquali, Cibles Thérapeutiques et conception de médicaments - Fabrice Leclerc, Institut de Biologie Intégrative de la Cellule - Sebastian Will, Laboratoire dínformatique de l\'École polytechnique [Palaiseau]
15:10-17:40 (2h30)
› Long-read error correction: a survey and qualitative comparison - Pierre Morisse
11:00-11:20 (20min)
› UMI-VarCal: a new UMI-based variant caller that efficiently improves low-frequency variant detection in paired-end sequencing NGS libraries - Vincent SATER
11:20-11:40 (20min)
› Towards a better understanding of the low discovery rate of short-read based insertion variant callers - Wesley Delage
11:40-12:00 (20min)
› Overcoming uncollapsed haplotypes in long-read assemblies of non-model organisms - Nadège Guiglielmoni
12:00-12:20 (20min)
› REINDEER: efficient indexing of k-mer presence and abundance in sequencing datasets - Camille Marchet
12:20-12:40 (20min)
› Guidelines for cell-type heterogeneity quantification based on a comparative analysis of reference-free DNA methylation deconvolution software - Clémentine Decamps
09:00-09:20 (20min)
› Designing a statistical and user friendly application to analyse cell imaging - Rachel Torchet
09:20-09:40 (20min)
› PRECISE: A domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors - Soufiane Mourragui
09:40-10:00 (20min)
› Using the Human Cell Atlas for tracking SARS-CoV-2 entry factors - Christophe Becavin
10:00-10:20 (20min)
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